Lab8- New Primer Information

Primer information

Primer Pair

Contig #

Repeat sequence unit

Left Seq.

Right Seq.

Exp. Frag. Size (bp)

Lowest Tm(°C)

1

31898

AG

GCAATGATGACTGCCTTTGA

TGCAAATTAACGTAAGTGAGAGTCA

186

58.4

2

34449

AG

TTCAGGTTTTCTTTATCCATTTGA

TTTCTCCATTTCTCCATTTCTACA

127

56

3

259859

AAG

TCTCCTTCCTCTAATACCTCTACTCC

TCATTGATGTGGGTAAGAATGAG

292

53.4

4

255505

AAAT

GTTGCTCAGCTCCAAGCTCT

TGCAATACGCAAATCATTTTAT

127

59.2

5

37894

AAG

CGAGCTCTCACAGGTAAATTTCT

AACCGCATAGGTGTCTCTGG

177

61

6

50628

AAAT

GGATTTGTTTCTGTTTACGGAGT

ATCCATGACGTCGGGATAAT

124

58.4

7

67295

AG

AGGTTGCAGAAGGAGGCTCT

CCGTCCTGGAGCCATATCT

142

62.3

8

94421

AAGAGG

TGAATGGTGTTAAAACTAATGAACAA

TCACAGAATTACAACTTTCACAGTA

264

56.7

9

94990

ACAGAG

CGCTGTTTGAACGTGAATTT

CCACACTCAGTGAGAGAGAGAGAG

199

56.3

10

99468

AAAT

TTATCAGTGATCTGAAGACACCTC

AGTTCGACTATTATGAGTGCGTTA

173

59.4

11

107719

ACAT

GAGCTTTTATTCAACTTGCATTG

TAGCAAGATTCCACCCGAAC

111

57.4

12

120552

AAAT

TTCGTGATAATCCTATCTGTGATTT

TGGTTGATCGGTGTAAAACTTG

300

58

13

121086

AAG

GTCCGGAGCAGATAAAGCAA

GTGTAAAGATGCTCTTGCTAACG

150

60.4

14

121429

AAG

TGTTAAACTCGCGTTTGTGG

CCGTCAAAACTGCGTCATAG

127

58.4

15

125823

AATT

TTCTGTAAGCATCCTAAATGCAA

AGGTGACCAATTGTTTGGAA

136

56.3

16

132879

ACAG

GCCTTTTTCTGTTTACTAACAGTTCA

ATCGTTTGATGCCGGCATTA

209

58.4

17

141545

ACAT

GGTCTCACACATCCGCAATA

TGACCAACATACGATTTTCTTCAC

131

59.4

18

143022

ACAG

TCTACATAACGAAAATCCTGTCG

GAAGAACGCCAACAGACAGA

200

59.2

19

143214

AG

CTCTGTCTCGATCTCTCTTTGC

TCATTATTGATTTGCATTACAGAAA

146

54.7

20

170737

ACAG

AACGGTTACTGAGATTACGAAGC

ACGAAAATCCACGTCACTCA

119

58.4

21

171469

ACTAGT

CCGTACGCTGGAAGAAAAGA

TGGAGTTATCGACCGTACCA

204

60.4

22

182441

AATC

TTTTGTAGTTTGTTTTTATATCTGCA

AGGTTGGTCATGGGGTTGAT

181

55.5

23

197614

AAG

GCTTGACGCGTAGTTGTGAA

CAAAAGAACGACGTAAACACG

188

58.7

24

210923

AG

TGTCTGACGTTTGACGTTCC

AAATCGGGTGACTGAGTTT

136

56.7

25

227899

ACAG

CAGCGGTTACTGAGATTAGATGG

CGAAAATCCACATCACTCATTT

237

57.1

26

229686

AAGGTC

AATGTATGTTCTGGAGGAGCAA

GGTTTGATTCCTAGTTGAGGATTT

174

58.9